Gene detail information of Glyur002606s00033945.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G22880.23.00E-105leucoanthocyanidin dioxygenase
NRXP_003611189.10Leucoanthocyanidin dioxygenase [Medicago truncatula]
COGYP_004789591.15.00E-142OG-Fe(II) oxygenase [Muricauda ruestringensis DSM 13258]
Swissprottr|P51091|LDOX_MALDO7.00E-165Leucoanthocyanidin dioxygenase
trEMBLtr|A8RRU3|A8RRU3_MEDTR0Leucoanthocyanidin dioxygenase-like protein {ECO:0000313|EMBL:AES94147.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold026063493137264-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05277E1.14.11.19 EC:1.14.11.19 Flavonoid biosynthesis map00941


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002606s00033945.1PF14226.1DIOX_N811861.40E-16
Glyur002606s00033945.1PF03171.152OG-FeII_Oxy2252942.10E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.730
SRR1783600control0.711
SRR1783602moderate drought stress2.221
SRR1811619moderate drought stress2.244

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.187
DRR006522Root Winter glycyrrhizin high producing strain0.189
DRR006523Root Summer glycyrrhizin low producing strain0.058
DRR006524Root Summer glycyrrhizin low producing strain0.108
DRR006525Leaf Summer glycyrrhizin high producing strain231.208
DRR006526Leaf Summer glycyrrhizin high producing strain230.118

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.366
SRR2868004Drought Stress(Tissue:root)1.455
SRR2967015Control (Tissue:root)2.664

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave282.909
SRR9715740Leave16.396
SRR9715741Leave73.749
SRR9715739Root0.339
SRR9715742Root0.615
SRR9715743Root0.620

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.213
SRR8749028MeJA induced 9h0.208
SRR8749029MeJA induced 9h0.364
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.150

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.032
SRR8400027Control-Root0.602

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved