Gene detail information of Glyur002613s00038307.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G19020.11.00E-10chromomethylase 2
NRXP_007156278.14.04E-14hypothetical protein PHAVU_003G273100g [Phaseolus vulgaris]
Swissprottr|Q94F87|CMT2_ARATH2.00E-11DNA (cytosine-5)-methyltransferase CMT2
trEMBLtr|V7CDL5|V7CDL5_PHAVU2.00E-14Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0261323544024+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00558DNMT1, dcm EC:2.1.1.37 Cysteine and methionine metabolism map00270
MicroRNAs in cancermap05206


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
----------


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.278
SRR1783600control13.899
SRR1783602moderate drought stress27.315
SRR1811619moderate drought stress25.264

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.892
DRR006520Root Summer glycyrrhizin high producing strain10.387
DRR006521Root Winter glycyrrhizin high producing strain23.655
DRR006522Root Winter glycyrrhizin high producing strain23.227
DRR006523Root Summer glycyrrhizin low producing strain3.578
DRR006524Root Summer glycyrrhizin low producing strain4.320
DRR006525Leaf Summer glycyrrhizin high producing strain5.585
DRR006526Leaf Summer glycyrrhizin high producing strain5.815

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.285
SRR2868004Drought Stress(Tissue:root)11.291
SRR2967015Control (Tissue:root)11.139

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.568
SRR9715740Leave13.562
SRR9715741Leave13.876
SRR9715739Root3.304
SRR9715742Root8.198
SRR9715743Root8.942

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.751
SRR8749028MeJA induced 9h10.724
SRR8749029MeJA induced 9h10.942
SRR8749030Uninduced9.355
SRR8749031Uninduced7.261
SRR8749032Uninduced6.850

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.391
SRR8400027Control-Root30.467

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved