Gene detail information of Glyur002613s00038312.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75280.1 | 4.00E-39 | NmrA-like negative transcriptional regulator family protein |
| NR | ABC71326.1 | 2.07E-114 | leucoanthocyanidin reductase LAR1-1 [Lotus corniculatus] |
| Swissprot | tr|Q84V83|LAR_DESUN | 2.00E-109 | Leucoanthocyanidin reductase |
| trEMBL | tr|A1XEF6|A1XEF6_LOTCO | 8.00E-115 | Leucoanthocyanidin reductase LAR1-1 {ECO:0000313|EMBL:ABC71326.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02613 | 15866 | 19442 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13081 | LAR | EC:1.17.1.3 | Flavonoid biosynthesis | map00941 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002613s00038312.1 | PF05368.8 | NmrA | 17 | 166 | 2.30E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.939 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.862 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.191 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 114.277 |
| SRR9715740 | Leave | 0.096 |
| SRR9715741 | Leave | 26.915 |
| SRR9715739 | Root | 0.419 |
| SRR9715742 | Root | 0.504 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.050 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.138 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.086 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.094 |
| SRR8400027 | Control-Root | 0.272 |