Gene detail information of Glyur002616s00038220.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14590.1 | 5.00E-126 | Nucleotide-diphospho-sugar transferase family protein |
| NR | XP_004498201.1 | 0 | PREDICTED: uncharacterized protein At4g15970-like [Cicer arietinum] |
| Swissprot | tr|P0C042|Y4597_ARATH | 6.00E-102 | Uncharacterized protein At4g15970 |
| trEMBL | tr|A0A072THA0|A0A072THA0_MEDTR | 0 | Nucleotide-diphospho-sugar transferase family protein {ECO:0000313|EMBL:KEH16338.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02616 | 25399 | 28659 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT77 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002616s00038220.1 | PF03407.11 | Nucleotid_trans | 194 | 392 | 1.70E-61 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.934 |
| SRR1783600 | control | 9.065 |
| SRR1783602 | moderate drought stress | 11.027 |
| SRR1811619 | moderate drought stress | 10.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.927 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.111 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.636 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.338 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.219 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.038 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.652 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.316 |
| SRR2868004 | Drought Stress(Tissue:root) | 11.386 |
| SRR2967015 | Control (Tissue:root) | 9.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.321 |
| SRR9715740 | Leave | 5.060 |
| SRR9715741 | Leave | 4.755 |
| SRR9715739 | Root | 2.004 |
| SRR9715742 | Root | 5.965 |
| SRR9715743 | Root | 5.799 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.088 |
| SRR8749028 | MeJA induced 9h | 6.930 |
| SRR8749029 | MeJA induced 9h | 2.850 |
| SRR8749030 | Uninduced | 10.824 |
| SRR8749031 | Uninduced | 9.118 |
| SRR8749032 | Uninduced | 5.922 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.700 |
| SRR8400027 | Control-Root | 11.742 |