Gene detail information of Glyur002631s00041912.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G65640.1 | 3.00E-53 | beta HLH protein 93 |
| NR | XP_003544841.1 | 4.09E-144 | PREDICTED: transcription factor bHLH93-like [Glycine max] |
| Swissprot | tr|Q9LSL1|BH093_ARATH | 1.00E-62 | Transcription factor bHLH93 |
| trEMBL | tr|I1MB28|I1MB28_SOYBN | 2.00E-144 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G36370.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02631 | 26717 | 29224 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002631s00041912.1 | PF00010.21 | HLH | 173 | 216 | 1.20E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 158.175 |
| SRR1783600 | control | 159.160 |
| SRR1783602 | moderate drought stress | 65.114 |
| SRR1811619 | moderate drought stress | 66.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.419 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.908 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 83.722 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 82.112 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.659 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.380 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.095 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.129 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 25.433 |
| SRR2868004 | Drought Stress(Tissue:root) | 25.389 |
| SRR2967015 | Control (Tissue:root) | 19.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.047 |
| SRR9715740 | Leave | 0.217 |
| SRR9715741 | Leave | 0.182 |
| SRR9715739 | Root | 4.865 |
| SRR9715742 | Root | 33.559 |
| SRR9715743 | Root | 26.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.758 |
| SRR8749028 | MeJA induced 9h | 2.133 |
| SRR8749029 | MeJA induced 9h | 4.592 |
| SRR8749030 | Uninduced | 1.252 |
| SRR8749031 | Uninduced | 0.527 |
| SRR8749032 | Uninduced | 0.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 91.695 |
| SRR8400027 | Control-Root | 97.726 |