Gene detail information of Glyur002647s00039509.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G30180.1 | 3.00E-09 | brassinosteroid-6-oxidase 2 |
| NR | XP_002316079.2 | 9.91E-09 | hypothetical protein POPTR_0010s16430g [Populus trichocarpa] |
| Swissprot | tr|Q940V4|C85A2_ARATH | 3.00E-10 | Cytochrome P450 85A2 |
| trEMBL | tr|B9HXI0|B9HXI0_POPTR | 4.00E-09 | Uncharacterized protein {ECO:0000313|EMBL:EEF02250.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02647 | 5518 | 7160 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K12640 | CYP85A2, BR6OX2 | EC:1.14.-.- | Brassinosteroid biosynthesis | map00905 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 1.914 |
| SRR1811619 | moderate drought stress | 1.004 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.392 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.048 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.110 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.422 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.356 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.855 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.308 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.177 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.955 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.054 |
| SRR8400027 | Control-Root | 3.330 |