Gene detail information of Glyur002648s00038868.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G68020.20UDP-Glycosyltransferase / trehalose-phosphatase family protein
NRXP_004503340.10PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6-like [Cicer arietinum]
COGYP_006545085.13.00E-132alpha,alpha-trehalose-phosphate synthase (UDP-forming) [Methanoculleus bourgensis MS2]
Swissprottr|Q94AH8|TPS6_ARATH0Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
trEMBLtr|G7LBG6|G7LBG6_MEDTR0Trehalose-6-phosphate synthase domain protein {ECO:0000313|EMBL:AET05453.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold02648795011588-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT20


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16055TPS EC:2.4.1.15 3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002648s00038868.1PF00982.16Glyco_transf_20615518.80E-182
Glyur002648s00038868.1PF02358.11Trehalose_PPase6008345.10E-77


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.781
SRR1783600control9.522
SRR1783602moderate drought stress18.714
SRR1811619moderate drought stress18.667

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.818
DRR006520Root Summer glycyrrhizin high producing strain22.678
DRR006521Root Winter glycyrrhizin high producing strain54.111
DRR006522Root Winter glycyrrhizin high producing strain52.813
DRR006523Root Summer glycyrrhizin low producing strain36.842
DRR006524Root Summer glycyrrhizin low producing strain36.846
DRR006525Leaf Summer glycyrrhizin high producing strain18.844
DRR006526Leaf Summer glycyrrhizin high producing strain18.574

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.122
SRR2868004Drought Stress(Tissue:root)54.343
SRR2967015Control (Tissue:root)85.163

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave25.135
SRR9715740Leave33.671
SRR9715741Leave25.007
SRR9715739Root17.099
SRR9715742Root28.569
SRR9715743Root29.918

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h54.095
SRR8749028MeJA induced 9h122.081
SRR8749029MeJA induced 9h93.439
SRR8749030Uninduced40.770
SRR8749031Uninduced120.302
SRR8749032Uninduced84.996

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.079
SRR8400027Control-Root18.496

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved