Gene detail information of Glyur002666s00040270.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G77120.12.00E-115alcohol dehydrogenase 1
NRXP_003602129.12.15E-178Alcohol dehydrogenase [Medicago truncatula]
COGNP_967848.15.00E-89alcohol dehydrogenase / formaldehyde dehydrogenase [Bdellovibrio bacteriovorus HD100]
Swissprottr|P12886|ADH1_PEA5.00E-180Alcohol dehydrogenase 1
trEMBLtr|G7J5M6|G7J5M6_MEDTR8.00E-179Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:AES72380.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold026663163633937-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K18857ADH1 EC:1.1.1.1 Glycolysis / Gluconeogenesis map00010
Fatty acid degradationmap00071
alpha-Linolenic acid metabolismmap00592
Tyrosine metabolismmap00350


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002666s00040270.1PF00107.21ADH_zinc_N942182.10E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control115.525
SRR1783600control116.849
SRR1783602moderate drought stress47.631
SRR1811619moderate drought stress46.382

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain155.869
DRR006520Root Summer glycyrrhizin high producing strain155.842
DRR006521Root Winter glycyrrhizin high producing strain721.327
DRR006522Root Winter glycyrrhizin high producing strain693.731
DRR006523Root Summer glycyrrhizin low producing strain393.385
DRR006524Root Summer glycyrrhizin low producing strain393.320
DRR006525Leaf Summer glycyrrhizin high producing strain24.103
DRR006526Leaf Summer glycyrrhizin high producing strain23.989

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)134.522
SRR2868004Drought Stress(Tissue:root)128.949
SRR2967015Control (Tissue:root)147.672

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave33.707
SRR9715740Leave31.828
SRR9715741Leave40.146
SRR9715739Root363.181
SRR9715742Root174.749
SRR9715743Root213.688

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1245.053
SRR8749028MeJA induced 9h1290.206
SRR8749029MeJA induced 9h2444.351
SRR8749030Uninduced1741.198
SRR8749031Uninduced3648.185
SRR8749032Uninduced3855.098

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root293.805
SRR8400027Control-Root255.688