Gene detail information of Glyur002668s00041923.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRATCG01090.14.00E-81NADPH dehydrogenases
NRYP_009027321.14.42E-107NADH-plastoquinone oxidoreductase subunit I (chloroplast) [Glycyrrhiza glabra]
COGYP_007161776.12.00E-77NAD(P)H-quinone oxidoreductase subunit I [Cyanobacterium aponinum PCC 10605]
Swissprottr|Q09FQ6|NDHI_NANDO2.00E-107NAD(P)H-quinone oxidoreductase subunit I, chloroplastic {ECO:0000255|HAMAP-Rule:MF_01351}
trEMBLtr|A0A023I716|A0A023I716_GLYGL2.00E-107NAD(P)H-quinone oxidoreductase subunit I, chloroplastic {ECO:0000256|SAAS:SAAS00064212}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold026683295233795-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05580ndhI EC:1.6.5.3 Oxidative phosphorylation map00190


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


cellular_component

GO:0016020  membrane


molecular_function

GO:0008137  NADH dehydrogenase (ubiquinone) activity

GO:0016651  oxidoreductase activity, acting on NAD(P)H

GO:0051536  iron-sulfur cluster binding

GO:0051539  4 iron, 4 sulfur cluster binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002668s00041923.1PF13237.1Fer4_10601157.30E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.855
SRR1783600control12.867
SRR1783602moderate drought stress13.426
SRR1811619moderate drought stress11.969

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.632
DRR006520Root Summer glycyrrhizin high producing strain10.774
DRR006521Root Winter glycyrrhizin high producing strain3.848
DRR006522Root Winter glycyrrhizin high producing strain4.049
DRR006523Root Summer glycyrrhizin low producing strain18.355
DRR006524Root Summer glycyrrhizin low producing strain19.763
DRR006525Leaf Summer glycyrrhizin high producing strain66.943
DRR006526Leaf Summer glycyrrhizin high producing strain70.325

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.377
SRR2868004Drought Stress(Tissue:root)0.847
SRR2967015Control (Tissue:root)0.906

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.486
SRR9715740Leave5.190
SRR9715741Leave16.354
SRR9715739Root13.575
SRR9715742Root1.536
SRR9715743Root4.699

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.899
SRR8749028MeJA induced 9h0.379
SRR8749029MeJA induced 9h0.819
SRR8749030Uninduced0.656
SRR8749031Uninduced0.644
SRR8749032Uninduced1.750

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.086
SRR8400027Control-Root0.150

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved