Gene detail information of Glyur002699s00033551.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G42490.17.00E-129Copper amine oxidase family protein
NRXP_004509661.10PREDICTED: copper methylamine oxidase-like isoform X1 [Cicer arietinum]
COGYP_007125935.11.00E-79Copper amine oxidase domain-containing protein [Gloeocapsa sp. PCC 7428]
Swissprottr|Q8H1H9|AMO_ARATH2.00E-28Primary amine oxidase (Precursor)
trEMBLtr|V7C6I5|V7C6I5_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW25772.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold02699416711558+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00276AOC3, AOC2, tynA EC:1.4.3.21 Glycine, serine and threonine metabolism map00260
Tyrosine metabolismmap00350
Phenylalanine metabolismmap00360
beta-Alanine metabolismmap00410
Isoquinoline alkaloid biosynthesismap00950
Tropane, piperidine and pyridine alkaloid biosynthesismap00960


Gene Ontology

biological_process

GO:0009308  amine metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005507  copper ion binding

GO:0008131  primary amine oxidase activity

GO:0048038  quinone binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002699s00033551.2PF02728.11Cu_amine_oxidN31832861.80E-33
Glyur002699s00033551.2PF01179.15Cu_amine_oxid3114942.90E-76


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control53.926
SRR1783600control54.375
SRR1783602moderate drought stress76.489
SRR1811619moderate drought stress76.537

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain82.978
DRR006520Root Summer glycyrrhizin high producing strain81.948
DRR006521Root Winter glycyrrhizin high producing strain8.909
DRR006522Root Winter glycyrrhizin high producing strain8.552
DRR006523Root Summer glycyrrhizin low producing strain144.394
DRR006524Root Summer glycyrrhizin low producing strain144.924
DRR006525Leaf Summer glycyrrhizin high producing strain25.047
DRR006526Leaf Summer glycyrrhizin high producing strain25.157

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)380.545
SRR2868004Drought Stress(Tissue:root)545.025
SRR2967015Control (Tissue:root)826.190

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave31.533
SRR9715740Leave52.467
SRR9715741Leave69.188
SRR9715739Root51.854
SRR9715742Root94.298
SRR9715743Root86.986

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.124
SRR8749028MeJA induced 9h11.435
SRR8749029MeJA induced 9h5.082
SRR8749030Uninduced28.872
SRR8749031Uninduced12.658
SRR8749032Uninduced19.490

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root272.705
SRR8400027Control-Root262.730

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved