Gene detail information of Glyur002705s00034740.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G30040.1 | 9.00E-97 | mitogen-activated protein kinase kinase kinase 14 |
| NR | XP_004490618.1 | 1.67E-174 | PREDICTED: protein kinase byr2-like [Cicer arietinum] |
| COG | YP_007110479.1 | 6.00E-19 | serine/threonine protein kinase [Geitlerinema sp. PCC 7407] |
| Swissprot | tr|O22042|M3K3_ARATH | 4.00E-41 | Mitogen-activated protein kinase kinase kinase 3 |
| trEMBL | tr|K7KA73|K7KA73_SOYBN | 3.00E-159 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G39350.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02705 | 25445 | 26937 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:4.4.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002705s00034740.1 | PF00069.20 | Pkinase | 6 | 264 | 7.00E-47 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.728 |
| SRR1783600 | control | 0.776 |
| SRR1783602 | moderate drought stress | 1.072 |
| SRR1811619 | moderate drought stress | 1.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 52.333 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 53.202 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 54.788 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 54.100 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 55.586 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 56.475 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.169 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 28.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 16.446 |
| SRR2868004 | Drought Stress(Tissue:root) | 60.142 |
| SRR2967015 | Control (Tissue:root) | 320.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 424.145 |
| SRR9715740 | Leave | 275.913 |
| SRR9715741 | Leave | 359.233 |
| SRR9715739 | Root | 233.353 |
| SRR9715742 | Root | 395.455 |
| SRR9715743 | Root | 358.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 266.094 |
| SRR8749028 | MeJA induced 9h | 233.669 |
| SRR8749029 | MeJA induced 9h | 276.209 |
| SRR8749030 | Uninduced | 62.822 |
| SRR8749031 | Uninduced | 67.296 |
| SRR8749032 | Uninduced | 120.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 24.898 |
| SRR8400027 | Control-Root | 31.377 |