Gene detail information of Glyur002706s00038107.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G22370.2 | 2.00E-103 | UDP-glucosyl transferase 85A5 |
| NR | CBI38430.3 | 0 | unnamed protein product [Vitis vinifera] |
| Swissprot | tr|F8WKW1|UGT2_GARJA | 2.00E-127 | 7-deoxyloganetin glucosyltransferase |
| trEMBL | tr|G7KLW6|G7KLW6_MEDTR | 0 | UDP-glucosyltransferase {ECO:0000313|EMBL:AES74872.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02706 | 22385 | 29044 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002706s00038107.1 | PF00201.13 | UDPGT | 64 | 333 | 2.30E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.860 |
| SRR1783600 | control | 1.820 |
| SRR1783602 | moderate drought stress | 3.176 |
| SRR1811619 | moderate drought stress | 3.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.869 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.840 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.452 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.749 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.212 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.403 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.355 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.222 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.732 |
| SRR2967015 | Control (Tissue:root) | 8.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.477 |
| SRR9715740 | Leave | 5.492 |
| SRR9715741 | Leave | 10.447 |
| SRR9715739 | Root | 2.239 |
| SRR9715742 | Root | 9.329 |
| SRR9715743 | Root | 8.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.418 |
| SRR8749028 | MeJA induced 9h | 19.802 |
| SRR8749029 | MeJA induced 9h | 8.008 |
| SRR8749030 | Uninduced | 26.454 |
| SRR8749031 | Uninduced | 8.976 |
| SRR8749032 | Uninduced | 6.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.998 |
| SRR8400027 | Control-Root | 4.975 |