Gene detail information of Glyur002719s00034967.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G67310.10Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
NRXP_004504403.10PREDICTED: calmodulin-binding transcription activator 4-like isoform X1 [Cicer arietinum]
Swissprottr|Q9FYG2|CMTA4_ARATH0Calmodulin-binding transcription activator 4
trEMBLtr|K7KQB0|K7KQB0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G28090.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold027191440823008+


Gene family

Gene familysubfamily
Transcription Factors FamilyCAMTA


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0005515  protein binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002719s00034967.1PF03859.11CG-1131291.60E-52
Glyur002719s00034967.1PF01833.19TIG4295122.70E-08
Glyur002719s00034967.1PF12796.2Ank_26206842.30E-08
Glyur002719s00034967.1PF00612.22IQ8348520.013
Glyur002719s00034967.1PF00612.22IQ8578763.00E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.680
SRR1783600control14.746
SRR1783602moderate drought stress16.267
SRR1811619moderate drought stress15.928

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.044
DRR006520Root Summer glycyrrhizin high producing strain10.761
DRR006521Root Winter glycyrrhizin high producing strain23.756
DRR006522Root Winter glycyrrhizin high producing strain23.245
DRR006523Root Summer glycyrrhizin low producing strain15.003
DRR006524Root Summer glycyrrhizin low producing strain15.110
DRR006525Leaf Summer glycyrrhizin high producing strain14.809
DRR006526Leaf Summer glycyrrhizin high producing strain14.855

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)28.794
SRR2868004Drought Stress(Tissue:root)25.489
SRR2967015Control (Tissue:root)30.010

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.652
SRR9715740Leave10.006
SRR9715741Leave12.652
SRR9715739Root4.988
SRR9715742Root17.242
SRR9715743Root15.372

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.217
SRR8749028MeJA induced 9h12.703
SRR8749029MeJA induced 9h11.570
SRR8749030Uninduced13.381
SRR8749031Uninduced14.342
SRR8749032Uninduced9.038

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.089
SRR8400027Control-Root24.373

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved