Gene detail information of Glyur002719s00034969.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G27320.10histidine kinase 3
NRXP_003524900.10PREDICTED: histidine kinase 3-like isoform X1 [Glycine max]
COGYP_008089003.19.00E-87PAS domain S-box [Chthonomonas calidirosea T49]
Swissprottr|Q9C5U1|AHK3_ARATH0Histidine kinase 3
trEMBLtr|I1K3M7|I1K3M7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G28070.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold027192678033385-


Gene family

Gene familysubfamily
Transcription Factors FamilyOrphans


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14489AHK2_3_4 EC:2.7.13.3 Plant hormone signal transduction map04075


Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system

GO:0007165  signal transduction

GO:0016310  phosphorylation


cellular_component

GO:0016020  membrane


molecular_function

GO:0000155  phosphorelay sensor kinase activity

GO:0004871  signal transducer activity

GO:0016772  transferase activity, transferring phosphorus-containing groups

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002719s00034969.1PF03924.8CHASE1713672.80E-41
Glyur002719s00034969.1PF00512.20HisKA4535168.10E-18
Glyur002719s00034969.1PF02518.21HATPase_c5657254.20E-30
Glyur002719s00034969.1PF00072.19Response_reg90510322.90E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.501
SRR1783600control11.593
SRR1783602moderate drought stress15.983
SRR1811619moderate drought stress16.094

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.409
DRR006520Root Summer glycyrrhizin high producing strain16.087
DRR006521Root Winter glycyrrhizin high producing strain19.380
DRR006522Root Winter glycyrrhizin high producing strain18.786
DRR006523Root Summer glycyrrhizin low producing strain24.255
DRR006524Root Summer glycyrrhizin low producing strain24.097
DRR006525Leaf Summer glycyrrhizin high producing strain17.612
DRR006526Leaf Summer glycyrrhizin high producing strain17.492

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)40.929
SRR2868004Drought Stress(Tissue:root)61.672
SRR2967015Control (Tissue:root)71.733

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.236
SRR9715740Leave28.788
SRR9715741Leave25.142
SRR9715739Root5.820
SRR9715742Root29.153
SRR9715743Root24.213

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h71.469
SRR8749028MeJA induced 9h45.714
SRR8749029MeJA induced 9h29.942
SRR8749030Uninduced22.431
SRR8749031Uninduced13.152
SRR8749032Uninduced11.195

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root33.991
SRR8400027Control-Root33.458

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved