Gene detail information of Glyur002726s00036973.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G23870.10trehalose-phosphatase/synthase 9
NRXP_004509840.10PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9-like [Cicer arietinum]
COGYP_004625437.19.00E-132alpha,alpha-trehalose-phosphate synthase [Thermodesulfatator indicus DSM 15286]
Swissprottr|Q9LRA7|TPS9_ARATH0Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
trEMBLtr|I1N1F3|I1N1F3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G18590.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold027262142826542-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT20


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16055TPS EC:2.4.1.15 3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002726s00036973.1PF00982.16Glyco_transf_20605461.10E-185
Glyur002726s00036973.1PF02358.11Trehalose_PPase5958295.60E-82


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.922
SRR1783600control7.781
SRR1783602moderate drought stress12.658
SRR1811619moderate drought stress12.435

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.439
DRR006520Root Summer glycyrrhizin high producing strain9.543
DRR006521Root Winter glycyrrhizin high producing strain5.121
DRR006522Root Winter glycyrrhizin high producing strain5.062
DRR006523Root Summer glycyrrhizin low producing strain14.962
DRR006524Root Summer glycyrrhizin low producing strain14.834
DRR006525Leaf Summer glycyrrhizin high producing strain6.853
DRR006526Leaf Summer glycyrrhizin high producing strain6.853

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)28.049
SRR2868004Drought Stress(Tissue:root)54.548
SRR2967015Control (Tissue:root)61.522

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave59.491
SRR9715740Leave46.902
SRR9715741Leave79.415
SRR9715739Root14.331
SRR9715742Root29.269
SRR9715743Root23.313

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.947
SRR8749028MeJA induced 9h55.867
SRR8749029MeJA induced 9h28.594
SRR8749030Uninduced32.455
SRR8749031Uninduced48.318
SRR8749032Uninduced27.889

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.210
SRR8400027Control-Root15.692

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved