Gene detail

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Gene detail information of Glyur002740s00035179.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G67000.1	4.00E-97	Protein kinase superfamily protein
NR	XP_004512903.1	0	PREDICTED: probable receptor-like protein kinase At1g67000-like isoform X2 [Cicer arietinum]
COG	YP_001958461.1	3.00E-26	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q3ECH2\|Y1670_ARATH	7.00E-109	Probable receptor-like protein kinase At1g67000 (Precursor)
trEMBL	tr\|I1KIZ4\|I1KIZ4_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G10460.1}

Sequence

Transcript Sequence

>Glyur002740s00035179.1
ATGTTTCCCACTGCTGATGCAACTAATGGAAGACACACAGTTGTGAAAAGTTTTTACCTGCTGCCACGGAATAAGAAGAAAATGGATGAACATATCCATATCATCATCAGCATCATCTGTTTCATCTTGTTATTAACCACTTTGCCACAATCCCATTGTCAATTACCACCGCCGCAACAACCCCGTTTCAATTATTCGGTTTGTAAGGAGCAGTTCTACAGCTGTGGTAACCTGTCCAACATCCACTATCCATTCTGGGATGGAAACAGCCGAGACAGACACTGTGGCGGCGGCGACGTATTCCAACTCCACTGCCACTATCTCTTTCACCTAAACAATACTTATACTACTATTCTAATCGGCTCACTGAACTTCACACGAACAGACCTTGCCCACGATGTGTGTTCCCCGCAATTCAACGACACCTACTTGAGTCCCACTCTGTTCCGGTATCCCGCAAATGTGCAAAACATCACCATATTCTACGACTGTTCCTCTGAAGATCACATCGACTACCCCATCTGCAATGACTCTACCTTTCATCTGGGTGCGGTAGATGCGGTGTTGAAAGAGTATCCAGTGTTCACGAGATGCTTGCGACATGTCCAAGTGCCGGTTCATGATCTGGAGCCTGGAGTAGAGGTATCTGACCGTAAAGGTCTGGAAGGGGTTTTAAATGAGGGGTTTGGGGTGGGATATACTGTGAACGACGACTGCATAAGATGCCTGGGAAGTGAAGGACATTGCTGGAACAGCACTGATGATGATGATATTGGGGAACATGTACAACGTTCCTGCTATTACTCTTATTGCCCCGACGGATCTGCTACCACCACACACTGTTCTGCTCCTCTGCCTCCTCACAAAAGATATCAAATGTTTCTTAACCCCCTACTTCTACTATTACAACAGATGCAAACCATCAAAACGAGTAGTAAAATTTGGTTAATAAAAAAGAATGACCATATCGAAGTATTTTTGAAAAATCATAGAGCTCTGTCCCAGAAAAGATATAAATTTCCAGAAATTAAGAAAATGATCAACTCATTCAAAGTTAAACTTGGTCAAGGTGGTTTTGGTGTTGTTTACAAAGGAAAAATGCCCAATGATATATTGAATGCATCCAAAGGAAATGGTGAAGAATTCATCAACGAGGTTGCTAGCATTAGTAGAACCTCTCACGTTAATGTTGTCACCCTTGTTGGATTTTGTTTTGAAGGCCGCAAGAAAGCTCTCATCTATGAATTTATGCCCAATGGTTCCCTCGACAAATTTATTTACAACAAGGGACCTGAAACCATGGCATCATTGAGCTGGGAGAATCTGTATCAAATTGCCAAAGAGATAGCTCGAGGGCTGGAGTACTTACATCGGGGATGTAACACTCAAATTTTACATTTTGACATAAAACCACATAATATTCTTTTGGATGAGAATTTCTGCCCAAAAATATCAGATTTTGGGCTTGCAAAGCTCTGTCCGAAGAAAGAGAGCATTGTTTCAATGTCAGATGCCAGAGGGACACTTGAGTATGTAGCTCCAGAAGTGTGGAATAGACATTTTGGAGGAGTTTCACACAAGTCTGATGTTTATAGCTATGGAATGATGCTGCTAGAAATGGTGGGAGCGAGGAAGAGTGTTAATGCTGAAGCAAGTCACACAAGTGAGATATACTTCACCCATTGGGTGTACAGCAGGCTAGAGCTAGGCAGTGATTTGAGACCTGATGGAGTGATTGGCATAGAAGAAAATGAGATTGCCAGAAGAATGACCATTGTTGGTTTATGGTGCATTCAAACACTTCCAAATGATAGGCCTACAATGAGTAGAGTGATTGATATGTGTTGGAAGTGCAGCGATGGCAATTTTGTTGATATACAAGTGAAATTTAGATCGACGACAAAGAATGACCAAGATATTGAAGCATTCTTAAAAAATCATGAAGCTCTATCACAGAAAAGATATAAATTCTTAGATGTCAAGAAGATGACCAACACATTCGAGGTTAAACTAGGTCAAGGTGGTTTTGGTGCTGTATACAAAGGAAAGCTACCCAATGGTAGCCCTGTGGCTGTAAAGATACTGAGTGCATCCAAAGGAAATGGTTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold02740	11794	23740	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002740s00035179.1	PF14380.1	WAK_assoc	188	268	1.30E-08
Glyur002740s00035179.1	PF00069.20	Pkinase	352	610	2.40E-41

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.055
SRR1783600	control	0.041
SRR1783602	moderate drought stress	0.341
SRR1811619	moderate drought stress	0.399

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.961
DRR006520	Root Summer glycyrrhizin high producing strain	1.954
DRR006521	Root Winter glycyrrhizin high producing strain	0.111
DRR006522	Root Winter glycyrrhizin high producing strain	0.088
DRR006523	Root Summer glycyrrhizin low producing strain	0.388
DRR006524	Root Summer glycyrrhizin low producing strain	0.448
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.740
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.594

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.363
SRR2868004	Drought Stress(Tissue:root)	0.273
SRR2967015	Control (Tissue:root)	0.379

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.801
SRR9715740	Leave	0.252
SRR9715741	Leave	1.415
SRR9715739	Root	0.034
SRR9715742	Root	0.233
SRR9715743	Root	0.197

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.491
SRR8749028	MeJA induced 9h	0.381
SRR8749029	MeJA induced 9h	0.148
SRR8749030	Uninduced	1.845
SRR8749031	Uninduced	0.142
SRR8749032	Uninduced	0.085

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.743
SRR8400027	Control-Root	1.567