Gene detail information of Glyur002747s00042594.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G08640.29.00E-55flavonol synthase 1
NRAEF14416.11.67E-97flavonol synthase [Onobrychis viciifolia]
COGYP_006813087.11.00E-072OG-Fe(II) oxygenase [Nocardia brasiliensis ATCC 700358]
Swissprottr|Q9ZWQ9|FLS_CITUN2.00E-78Flavonol synthase/flavanone 3-hydroxylase
trEMBLtr|K9JZ68|K9JZ68_ONOVI6.00E-98Flavonol synthase {ECO:0000313|EMBL:AEF14416.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold027471190419649+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05278FLS EC:1.14.11.23 Flavonoid biosynthesis map00941


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002747s00042594.1PF14226.1DIOX_N421495.30E-28
Glyur002747s00042594.1PF03171.152OG-FeII_Oxy1691997.00E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control97.072
SRR1783600control97.270
SRR1783602moderate drought stress86.985
SRR1811619moderate drought stress87.149

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.082
DRR006520Root Summer glycyrrhizin high producing strain5.646
DRR006521Root Winter glycyrrhizin high producing strain13.207
DRR006522Root Winter glycyrrhizin high producing strain12.185
DRR006523Root Summer glycyrrhizin low producing strain3.252
DRR006524Root Summer glycyrrhizin low producing strain3.261
DRR006525Leaf Summer glycyrrhizin high producing strain249.017
DRR006526Leaf Summer glycyrrhizin high producing strain248.967

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)157.766
SRR2868004Drought Stress(Tissue:root)111.402
SRR2967015Control (Tissue:root)96.521

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave63.130
SRR9715740Leave85.899
SRR9715741Leave42.285
SRR9715739Root39.132
SRR9715742Root47.966
SRR9715743Root45.821

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.522
SRR8749028MeJA induced 9h45.007
SRR8749029MeJA induced 9h40.866
SRR8749030Uninduced34.942
SRR8749031Uninduced36.143
SRR8749032Uninduced14.897

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root176.105
SRR8400027Control-Root141.075

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved