Gene detail information of Glyur002752s00035578.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G53850.28.00E-22haloacid dehalogenase-like hydrolase family protein
NRXP_004488728.19.92E-39PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1-like [Cicer arietinum]
COGYP_003268638.12.00E-10methylthioribulose-1-phosphate dehydratase [Haliangium ochraceum DSM 14365]
Swissprottr|B9SQI7|MTBC_RICCO2.00E-29Enolase-phosphatase E1 {ECO:0000255|HAMAP-Rule:MF_03118}
trEMBLtr|I1LV18|I1LV18_SOYBN2.00E-37Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G35390.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold027523453634760+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16054DEP1 EC:4.2.1.109 3.1.3.77 Cysteine and methionine metabolism map00270


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002752s00035578.1PF00596.16Aldolase_II33741.50E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control296.955
SRR1783600control287.685
SRR1783602moderate drought stress484.383
SRR1811619moderate drought stress482.392

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain178.477
DRR006520Root Summer glycyrrhizin high producing strain194.566
DRR006521Root Winter glycyrrhizin high producing strain66.241
DRR006522Root Winter glycyrrhizin high producing strain73.098
DRR006523Root Summer glycyrrhizin low producing strain151.105
DRR006524Root Summer glycyrrhizin low producing strain172.599
DRR006525Leaf Summer glycyrrhizin high producing strain118.324
DRR006526Leaf Summer glycyrrhizin high producing strain123.402

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)82.632
SRR2868004Drought Stress(Tissue:root)78.859
SRR2967015Control (Tissue:root)97.964

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave52.130
SRR9715740Leave48.953
SRR9715741Leave69.567
SRR9715739Root48.132
SRR9715742Root115.761
SRR9715743Root99.439

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h32.346
SRR8749028MeJA induced 9h63.208
SRR8749029MeJA induced 9h18.320
SRR8749030Uninduced14.455
SRR8749031Uninduced5.345
SRR8749032Uninduced15.277

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root146.661
SRR8400027Control-Root122.554

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved