Gene detail information of Glyur002759s00037152.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G67970.12.00E-74heat shock transcription factor A8
NRKHN16520.10Heat stress transcription factor A-8 [Glycine soja]
Swissprottr|Q9S7U5|HSFA8_ARATH4.00E-93Heat stress transcription factor A-8
trEMBLtr|I1KQD5|I1KQD5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G05220.4}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold027598183882+


Gene family

Gene familysubfamily
Transcription Factors FamilyHSF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated

GO:0009408  response to heat


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002759s00037152.1PF00447.12HSF_DNA-bind161081.40E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.042
SRR1783600control18.376
SRR1783602moderate drought stress22.992
SRR1811619moderate drought stress22.749

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.100
DRR006520Root Summer glycyrrhizin high producing strain22.384
DRR006521Root Winter glycyrrhizin high producing strain34.752
DRR006522Root Winter glycyrrhizin high producing strain33.608
DRR006523Root Summer glycyrrhizin low producing strain30.055
DRR006524Root Summer glycyrrhizin low producing strain31.382
DRR006525Leaf Summer glycyrrhizin high producing strain14.455
DRR006526Leaf Summer glycyrrhizin high producing strain14.433

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.305
SRR2868004Drought Stress(Tissue:root)24.936
SRR2967015Control (Tissue:root)22.796

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave35.304
SRR9715740Leave40.444
SRR9715741Leave41.809
SRR9715739Root17.130
SRR9715742Root29.776
SRR9715743Root24.482

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.537
SRR8749028MeJA induced 9h28.509
SRR8749029MeJA induced 9h25.019
SRR8749030Uninduced14.482
SRR8749031Uninduced19.500
SRR8749032Uninduced25.194

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.087
SRR8400027Control-Root22.963

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved