Gene detail information of Glyur002764s00035675.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH41393.1 | 8.84E-148 | 4'-phosphopantetheinyl transferase family protein [Medicago truncatula] |
| trEMBL | tr|A0A072VJ15|A0A072VJ15_MEDTR | 3.00E-148 | 4'-phosphopantetheinyl transferase family protein {ECO:0000313|EMBL:KEH41393.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02764 | 8301 | 10448 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K06133 | LYS5, acpT | EC:2.7.8.- | Pantothenate and CoA biosynthesis | map00770 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.492 |
| SRR1783600 | control | 10.916 |
| SRR1783602 | moderate drought stress | 23.516 |
| SRR1811619 | moderate drought stress | 24.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.876 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.624 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.557 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.521 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.819 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.718 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.327 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 18.978 |
| SRR2868004 | Drought Stress(Tissue:root) | 20.963 |
| SRR2967015 | Control (Tissue:root) | 20.707 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 10.142 |
| SRR9715740 | Leave | 16.359 |
| SRR9715741 | Leave | 16.875 |
| SRR9715739 | Root | 7.017 |
| SRR9715742 | Root | 8.687 |
| SRR9715743 | Root | 8.806 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.708 |
| SRR8749028 | MeJA induced 9h | 11.935 |
| SRR8749029 | MeJA induced 9h | 11.403 |
| SRR8749030 | Uninduced | 8.045 |
| SRR8749031 | Uninduced | 5.071 |
| SRR8749032 | Uninduced | 8.427 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 10.909 |
| SRR8400027 | Control-Root | 9.288 |