Gene detail information of Glyur002764s00035681.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39020.1 | 1.00E-75 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | XP_004514602.1 | 1.36E-120 | PREDICTED: diamine acetyltransferase 1-like [Cicer arietinum] |
| COG | NP_681890.1 | 8.00E-39 | acetyltransferase [Thermosynechococcus elongatus BP-1] |
| Swissprot | tr|Q9ZV06|NATAL_ARATH | 5.00E-107 | Probable acetyltransferase NATA1-like |
| trEMBL | tr|I3T2X2|I3T2X2_LOTJA | 1.00E-120 | Uncharacterized protein {ECO:0000313|EMBL:AFK46864.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02764 | 27714 | 28415 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002764s00035681.1 | PF00583.19 | Acetyltransf_1 | 135 | 210 | 2.80E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 75.272 |
| SRR1783600 | control | 74.119 |
| SRR1783602 | moderate drought stress | 63.970 |
| SRR1811619 | moderate drought stress | 61.753 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 78.850 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 77.583 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 29.354 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 33.977 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 42.493 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 42.955 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 31.745 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 30.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 64.582 |
| SRR2868004 | Drought Stress(Tissue:root) | 39.989 |
| SRR2967015 | Control (Tissue:root) | 29.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 21.991 |
| SRR9715740 | Leave | 12.525 |
| SRR9715741 | Leave | 21.880 |
| SRR9715739 | Root | 54.979 |
| SRR9715742 | Root | 56.358 |
| SRR9715743 | Root | 48.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.590 |
| SRR8749028 | MeJA induced 9h | 1.697 |
| SRR8749029 | MeJA induced 9h | 4.989 |
| SRR8749030 | Uninduced | 1.140 |
| SRR8749031 | Uninduced | 0.347 |
| SRR8749032 | Uninduced | 0.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 75.195 |
| SRR8400027 | Control-Root | 66.608 |