Gene detail information of Glyur002766s00038232.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G24480.10Protein kinase superfamily protein
NRXP_004490454.10PREDICTED: serine/threonine-protein kinase CTR1-like isoform X1 [Cicer arietinum]
COGYP_001958461.11.00E-41hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q05609|CTR1_ARATH2.00E-116Serine/threonine-protein kinase CTR1
trEMBLtr|K7M7T5|K7M7T5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G36140.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold027661930427729-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002766s00038232.1PF14381.1EDR1762871.60E-68
Glyur002766s00038232.1PF07714.12Pkinase_Tyr4707061.70E-55


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.894
SRR1783600control6.798
SRR1783602moderate drought stress4.185
SRR1811619moderate drought stress4.302

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.462
DRR006520Root Summer glycyrrhizin high producing strain2.559
DRR006521Root Winter glycyrrhizin high producing strain6.044
DRR006522Root Winter glycyrrhizin high producing strain5.987
DRR006523Root Summer glycyrrhizin low producing strain2.131
DRR006524Root Summer glycyrrhizin low producing strain2.028
DRR006525Leaf Summer glycyrrhizin high producing strain1.911
DRR006526Leaf Summer glycyrrhizin high producing strain1.928

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.742
SRR2868004Drought Stress(Tissue:root)29.604
SRR2967015Control (Tissue:root)33.816

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.560
SRR9715740Leave1.415
SRR9715741Leave2.102
SRR9715739Root7.353
SRR9715742Root4.582
SRR9715743Root5.883

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.209
SRR8749028MeJA induced 9h3.057
SRR8749029MeJA induced 9h5.133
SRR8749030Uninduced2.947
SRR8749031Uninduced3.982
SRR8749032Uninduced3.440

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.347
SRR8400027Control-Root20.499

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved