Gene detail

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Gene detail information of Glyur002779s00039770.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G14400.1	9.00E-111	cytochrome P450, family 724, subfamily A, polypeptide 1
NR	XP_003622324.1	0	Cytochrome P450 724B1 [Medicago truncatula]
COG	YP_007055574.1	5.00E-50	cytochrome P450 [Rivularia sp. PCC 7116]
Swissprot	tr\|Q6F4F5\|C724B_ORYSJ	2.00E-160	Cytochrome P450 724B1
trEMBL	tr\|G7L6A3\|G7L6A3_MEDTR	0	Cytochrome P450 family protein {ECO:0000313\|EMBL:AES78542.1}

Sequence

Transcript Sequence

>Glyur002779s00039770.1
ATGGGTTGGCCCTTGTTTGGAGAGACTCTTGGCTTCCTCAAGCCACATAGATCAAACTCCTTAGGAAGCTTCTTGCAACAACATTGTTCTAGGTATGGCAAAGTTTTCAAGTCACATCTCTTTGGTTCTCCCACCATAGTTTCGTGTGACTTGGAGCTCAACATGTTTATTCTTCAGAATGAAGGGAAGCTGTTCCCTGTTGATTACCCCAAGGTAATGCATAACATCTTGGGGAAGCTAGCTCTGCTTCTTGCCACAGGTGATCTCCACAAGAAGCTAAGAAGCACCATTATCAGTATTGTCAGTGCTTCAAAGTCAGAATCCAACTTCCTTCACTGTGTAGAAATGCTTGCACTCTCAAGGATTAACTCTTGGAATTTAAACTTTGGACAAGTTGCTTTCTATAAAGAAGCTAAAAGGTTTAGCATCAATGTAATGCTGAAGCACCTTCTGAACATTAATCCTGATGATCCCCTAGCCTCTGAGATTTTAGAGAACTTTGAGAACTATATCAAGGGCTTCATTTCACTGCCACTAAATATTCCAGGGACTGCATATTCCAAAGCCTTGAAGGCTAGAATAAGACTCTCGTGTATTATCAAAGACATTATAATGGAGAGGCGTAAAGGTAATGATAATGTGGGACCTGTGGAAGGAGGGAACCTCTTGAATGTGATTTTGTCAAAGCAGAACCTATGTGATGAAGAGATGGTGAGCATTGTATTGGACCTTTTGTTTGGTGGATATGAGACAACCGCAAAACTTCTGTCCATGATTGTCTATTTCCTTGGGGGAGCCCCTAATGCTTTACAAAGATTAAAGGAAGAACACCGAGTGATAAGGAAAAGTAAAAAGGAAAGGGAGCTTCTGAATTGGGAAGACTATAAGCAAATGGAGTTCACTCAAGATGTGATAAATGAAGCTCTGAGATGTGGGAATGTAGTCAAATTTCTGCACAGGAAAGCTGTTCAAGATATCAAATTCAAAGGGTGGAAGGTTCTTCCTGTCTTGTCAGCTCCACATTTGGATCCCACCCTTTTTGAAAACCCTTTGGAGTTCAATCCCTTTCGGTGGAATGACAATTCGACAAACAAGAAAGTGGCACCATTTGGTGGGGCTGATCTAGCTAAAGTGGAGATAGCATTCTTCCTTCATCATCTTGTCCTTAATTATAGGTGGGAAATCAAGGCAAACGACCACCCAATTGCTTTCCCTTACGTGGAGTTCGCCGGAGGGCTTCTAATGGATCTTGAACCCACAGGCACTACTTTTGGGGAACATCCTTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold02779	23346	27227	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP724A1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K12639	CYP724B1, D11	EC:1.14.13.-	Brassinosteroid biosynthesis	map00905

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002779s00039770.1	PF00067.17	p450	3	399	1.10E-45

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.026
SRR1783600	control	0.028
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.154
DRR006524	Root Summer glycyrrhizin low producing strain	0.257
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.335
SRR2868004	Drought Stress(Tissue:root)	0.546
SRR2967015	Control (Tissue:root)	0.641

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.000
SRR9715740	Leave	0.000
SRR9715741	Leave	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.011

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.047
SRR8400027	Control-Root	0.043