Gene detail information of Glyur002789s00039171.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G55700.1 | 2.00E-68 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_003538437.1 | 2.05E-167 | PREDICTED: UDP-glycosyltransferase 76F1-like [Glycine max] |
| Swissprot | tr|Q9M052|U76F1_ARATH | 1.00E-94 | UDP-glycosyltransferase 76F1 |
| trEMBL | tr|I1LML6|I1LML6_SOYBN | 8.00E-168 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G34730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02789 | 8184 | 13363 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002789s00039171.1 | PF00201.13 | UDPGT | 268 | 305 | 3.40E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.451 |
| SRR1783600 | control | 3.397 |
| SRR1783602 | moderate drought stress | 2.849 |
| SRR1811619 | moderate drought stress | 2.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.338 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.325 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 27.025 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.353 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.057 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.928 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.075 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.893 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.566 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.137 |
| SRR2967015 | Control (Tissue:root) | 6.641 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.167 |
| SRR9715740 | Leave | 5.631 |
| SRR9715741 | Leave | 7.208 |
| SRR9715739 | Root | 0.694 |
| SRR9715742 | Root | 2.413 |
| SRR9715743 | Root | 2.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.192 |
| SRR8749028 | MeJA induced 9h | 23.499 |
| SRR8749029 | MeJA induced 9h | 12.668 |
| SRR8749030 | Uninduced | 4.070 |
| SRR8749031 | Uninduced | 1.954 |
| SRR8749032 | Uninduced | 3.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.375 |
| SRR8400027 | Control-Root | 3.626 |