Gene detail information of Glyur002794s00040882.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G25550.1 | 5.00E-62 | myb-like transcription factor family protein |
| NR | XP_007143802.1 | 0 | hypothetical protein PHAVU_007G102900g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FGT7|ARR18_ARATH | 1.00E-15 | Two-component response regulator ARR18 |
| trEMBL | tr|V7BH50|V7BH50_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW15796.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02794 | 6986 | 8966 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
| EAR motif-containing Proteins | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002794s00040882.1 | PF00249.26 | Myb_DNA-binding | 212 | 263 | 5.90E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.209 |
| SRR1783600 | control | 5.153 |
| SRR1783602 | moderate drought stress | 17.838 |
| SRR1811619 | moderate drought stress | 18.588 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.792 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.623 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.850 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.683 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.288 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.559 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.538 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 24.933 |
| SRR2868004 | Drought Stress(Tissue:root) | 19.165 |
| SRR2967015 | Control (Tissue:root) | 27.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 29.182 |
| SRR9715740 | Leave | 21.193 |
| SRR9715741 | Leave | 24.012 |
| SRR9715739 | Root | 3.305 |
| SRR9715742 | Root | 5.289 |
| SRR9715743 | Root | 4.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 63.266 |
| SRR8749028 | MeJA induced 9h | 100.030 |
| SRR8749029 | MeJA induced 9h | 81.317 |
| SRR8749030 | Uninduced | 51.632 |
| SRR8749031 | Uninduced | 68.628 |
| SRR8749032 | Uninduced | 29.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 17.529 |
| SRR8400027 | Control-Root | 24.780 |