Gene detail information of Glyur002794s00040886.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G25560.12.00E-101AP2/B3 transcription factor family protein
NRACI46678.10DNA-binding protein [Galega orientalis]
Swissprottr|Q9C6M5|RAVL1_ARATH8.00E-136AP2/ERF and B3 domain-containing transcription repressor TEM1
trEMBLtr|B6EBS5|B6EBS5_9FABA0DNA-binding protein {ECO:0000313|EMBL:ACI46678.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold027942854029706-


Gene family

Gene familysubfamily
Transcription Factors FamilyRAV


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002794s00040886.1PF00847.15AP2661142.20E-11
Glyur002794s00040886.1PF02362.16B31932973.50E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.754
SRR1783600control15.782
SRR1783602moderate drought stress22.137
SRR1811619moderate drought stress22.143

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.705
DRR006520Root Summer glycyrrhizin high producing strain3.639
DRR006521Root Winter glycyrrhizin high producing strain241.786
DRR006522Root Winter glycyrrhizin high producing strain236.767
DRR006523Root Summer glycyrrhizin low producing strain17.889
DRR006524Root Summer glycyrrhizin low producing strain19.060
DRR006525Leaf Summer glycyrrhizin high producing strain35.099
DRR006526Leaf Summer glycyrrhizin high producing strain33.028

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.923
SRR2868004Drought Stress(Tissue:root)34.156
SRR2967015Control (Tissue:root)65.803

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave73.859
SRR9715740Leave84.215
SRR9715741Leave80.975
SRR9715739Root23.980
SRR9715742Root36.871
SRR9715743Root38.245

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h119.876
SRR8749028MeJA induced 9h157.766
SRR8749029MeJA induced 9h132.767
SRR8749030Uninduced71.572
SRR8749031Uninduced54.546
SRR8749032Uninduced101.249

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.870
SRR8400027Control-Root32.330

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved