Gene detail information of Glyur002830s00040395.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34620.1 | 3.00E-97 | Mitochondrial transcription termination factor family protein |
| NR | KHN37472.1 | 1.70E-157 | hypothetical protein glysoja_036249 [Glycine soja] |
| trEMBL | tr|I1L267|I1L267_SOYBN | 2.00E-157 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G11740.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02830 | 13349 | 14616 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | mTERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002830s00040395.1 | PF02536.9 | mTERF | 52 | 113 | 9.70E-05 |
| Glyur002830s00040395.1 | PF02536.9 | mTERF | 112 | 290 | 2.40E-42 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.074 |
| SRR1783600 | control | 0.039 |
| SRR1783602 | moderate drought stress | 0.247 |
| SRR1811619 | moderate drought stress | 0.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.008 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.913 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.786 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.344 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 99.098 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 96.896 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.438 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.650 |
| SRR2967015 | Control (Tissue:root) | 1.200 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 40.095 |
| SRR9715740 | Leave | 59.854 |
| SRR9715741 | Leave | 37.364 |
| SRR9715739 | Root | 0.264 |
| SRR9715742 | Root | 1.096 |
| SRR9715743 | Root | 0.388 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.653 |
| SRR8749028 | MeJA induced 9h | 7.150 |
| SRR8749029 | MeJA induced 9h | 3.548 |
| SRR8749030 | Uninduced | 2.438 |
| SRR8749031 | Uninduced | 0.408 |
| SRR8749032 | Uninduced | 2.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.402 |
| SRR8400027 | Control-Root | 1.883 |