Gene detail information of Glyur002831s00039359.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G24230.10Leucine-rich repeat protein kinase family protein
NRXP_003525917.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230-like [Glycine max]
COGYP_001192956.14.00E-33two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|C0LGK9|Y2242_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At2g24230 (Precursor)
trEMBLtr|I1KDD2|I1KDD2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G27230.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold028311537317985+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002831s00039359.1PF13855.1LRR_8871318.70E-10
Glyur002831s00039359.1PF00560.28LRR_11451621.1
Glyur002831s00039359.1PF00560.28LRR_11681890.38
Glyur002831s00039359.1PF00560.28LRR_13854080.00054
Glyur002831s00039359.1PF07714.12Pkinase_Tyr5626441.60E-11
Glyur002831s00039359.1PF07714.12Pkinase_Tyr6787716.90E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.362
SRR1783600control15.550
SRR1783602moderate drought stress14.119
SRR1811619moderate drought stress13.663

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.245
DRR006520Root Summer glycyrrhizin high producing strain11.965
DRR006521Root Winter glycyrrhizin high producing strain20.132
DRR006522Root Winter glycyrrhizin high producing strain19.029
DRR006523Root Summer glycyrrhizin low producing strain17.506
DRR006524Root Summer glycyrrhizin low producing strain17.677
DRR006525Leaf Summer glycyrrhizin high producing strain7.224
DRR006526Leaf Summer glycyrrhizin high producing strain7.041

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.449
SRR2868004Drought Stress(Tissue:root)4.855
SRR2967015Control (Tissue:root)6.443

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.728
SRR9715740Leave2.335
SRR9715741Leave2.198
SRR9715739Root4.929
SRR9715742Root13.092
SRR9715743Root12.111

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.029
SRR8749029MeJA induced 9h0.050
SRR8749030Uninduced0.142
SRR8749031Uninduced0.014
SRR8749032Uninduced0.040

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.696
SRR8400027Control-Root7.042

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved