Gene detail information of Glyur002851s00042079.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G50410.12.00E-32OBF binding protein 1
NRXP_003518090.12.26E-115PREDICTED: dof zinc finger protein DOF3.4 [Glycine max]
Swissprottr|Q39088|DOF34_ARATH8.00E-61Dof zinc finger protein DOF3.4
trEMBLtr|K7K6R9|K7K6R9_SOYBN8.00E-116Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G06970.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0285156306337-


Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002851s00042079.1PF02701.10zf-Dof26866.20E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control63.727
SRR1783600control63.111
SRR1783602moderate drought stress97.400
SRR1811619moderate drought stress95.993

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.180
DRR006520Root Summer glycyrrhizin high producing strain24.478
DRR006521Root Winter glycyrrhizin high producing strain3.544
DRR006522Root Winter glycyrrhizin high producing strain3.168
DRR006523Root Summer glycyrrhizin low producing strain19.215
DRR006524Root Summer glycyrrhizin low producing strain19.148
DRR006525Leaf Summer glycyrrhizin high producing strain0.519
DRR006526Leaf Summer glycyrrhizin high producing strain0.372

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)49.860
SRR2868004Drought Stress(Tissue:root)52.087
SRR2967015Control (Tissue:root)64.652

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.276
SRR9715740Leave0.183
SRR9715741Leave0.541
SRR9715739Root250.216
SRR9715742Root104.080
SRR9715743Root124.698

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.520
SRR8749028MeJA induced 9h1.003
SRR8749029MeJA induced 9h2.838
SRR8749030Uninduced0.146
SRR8749031Uninduced0.000
SRR8749032Uninduced1.220

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root118.480
SRR8400027Control-Root106.072

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved