Gene detail information of Glyur002867s00037023.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G28030.1 | 5.00E-91 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | KHN34770.1 | 2.38E-158 | hypothetical protein glysoja_032946 [Glycine soja] |
| COG | YP_007144194.1 | 6.00E-14 | N-acetyltransferase GCN5 [Crinalium epipsammum PCC 9333] |
| trEMBL | tr|I1LVV8|I1LVV8_SOYBN | 9.00E-159 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G01490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02867 | 6528 | 9378 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002867s00037023.1 | PF00583.19 | Acetyltransf_1 | 193 | 252 | 3.70E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.791 |
| SRR1783600 | control | 7.735 |
| SRR1783602 | moderate drought stress | 5.238 |
| SRR1811619 | moderate drought stress | 5.444 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.526 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.179 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.253 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.234 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.366 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.190 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 44.937 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 45.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.221 |
| SRR2868004 | Drought Stress(Tissue:root) | 13.717 |
| SRR2967015 | Control (Tissue:root) | 13.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 37.042 |
| SRR9715740 | Leave | 32.658 |
| SRR9715741 | Leave | 27.740 |
| SRR9715739 | Root | 7.354 |
| SRR9715742 | Root | 3.369 |
| SRR9715743 | Root | 4.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.755 |
| SRR8749028 | MeJA induced 9h | 5.253 |
| SRR8749029 | MeJA induced 9h | 4.549 |
| SRR8749030 | Uninduced | 11.930 |
| SRR8749031 | Uninduced | 8.701 |
| SRR8749032 | Uninduced | 7.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.342 |
| SRR8400027 | Control-Root | 13.574 |