Gene detail information of Glyur002893s00045737.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G07890.6 | 5.00E-05 | ascorbate peroxidase 1 |
| Swissprot | tr|Q9FE01|APX2_ORYSJ | 3.00E-06 | L-ascorbate peroxidase 2, cytosolic |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02893 | 4436 | 6679 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00434 | E1.11.1.11 | EC:1.11.1.11 | Ascorbate and aldarate metabolism | map00053 |
| Glutathione metabolism | map00480 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.110 |
| SRR1783600 | control | 2.147 |
| SRR1783602 | moderate drought stress | 1.536 |
| SRR1811619 | moderate drought stress | 1.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.489 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.940 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.663 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.111 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.860 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.892 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.535 |
| SRR2967015 | Control (Tissue:root) | 1.350 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.075 |
| SRR8749028 | MeJA induced 9h | 4.250 |
| SRR8749029 | MeJA induced 9h | 2.774 |
| SRR8749030 | Uninduced | 1.450 |
| SRR8749031 | Uninduced | 1.380 |
| SRR8749032 | Uninduced | 1.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.233 |
| SRR8400027 | Control-Root | 0.829 |