Gene detail information of Glyur002896s00038172.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G32240.1 | 1.00E-43 | Homeodomain-like superfamily protein |
| NR | ABO32773.1 | 2.64E-172 | MYB transcription factor MYB34 [Medicago truncatula] |
| Swissprot | tr|Q9C616|KAN2_ARATH | 2.00E-83 | Probable transcription factor KAN2 |
| trEMBL | tr|D2CGQ0|D2CGQ0_MEDTR | 1.00E-172 | MYB transcription factor MYB34 {ECO:0000313|EMBL:ABO32773.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02896 | 6141 | 12561 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002896s00038172.1 | PF00249.26 | Myb_DNA-binding | 227 | 275 | 1.30E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 32.158 |
| SRR1783600 | control | 31.967 |
| SRR1783602 | moderate drought stress | 31.787 |
| SRR1811619 | moderate drought stress | 31.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.822 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.618 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.672 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.371 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.412 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.508 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.310 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.540 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.720 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.691 |
| SRR2967015 | Control (Tissue:root) | 8.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.431 |
| SRR9715740 | Leave | 11.247 |
| SRR9715741 | Leave | 12.451 |
| SRR9715739 | Root | 2.368 |
| SRR9715742 | Root | 12.594 |
| SRR9715743 | Root | 11.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.002 |
| SRR8749028 | MeJA induced 9h | 0.316 |
| SRR8749029 | MeJA induced 9h | 0.055 |
| SRR8749030 | Uninduced | 0.211 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.828 |
| SRR8400027 | Control-Root | 13.518 |