Gene detail information of Glyur002912s00041038.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G47570.13.00E-161Leucine-rich repeat protein kinase family protein
NRXP_004512441.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum]
COGYP_001192956.14.00E-48two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|C0LGP4|Y3475_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At3g47570 (Precursor)
trEMBLtr|G7JB64|G7JB64_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AES71116.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold02912459821244-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002912s00041038.1PF13855.1LRR_8461066.10E-08
Glyur002912s00041038.1PF07714.12Pkinase_Tyr2154363.50E-34
Glyur002912s00041038.1PF08263.7LRRNT_25766154.10E-11
Glyur002912s00041038.1PF00560.28LRR_16686870.52
Glyur002912s00041038.1PF00560.28LRR_19159371.1
Glyur002912s00041038.1PF00560.28LRR_1101110320.01
Glyur002912s00041038.1PF12799.2LRR_4105910951.50E-06
Glyur002912s00041038.1PF00560.28LRR_1110911270.08
Glyur002912s00041038.1PF07714.12Pkinase_Tyr125213361.40E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.100
SRR1783600control0.122
SRR1783602moderate drought stress0.357
SRR1811619moderate drought stress0.415

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.257
DRR006520Root Summer glycyrrhizin high producing strain0.294
DRR006521Root Winter glycyrrhizin high producing strain0.175
DRR006522Root Winter glycyrrhizin high producing strain0.175
DRR006523Root Summer glycyrrhizin low producing strain0.109
DRR006524Root Summer glycyrrhizin low producing strain0.203
DRR006525Leaf Summer glycyrrhizin high producing strain0.092
DRR006526Leaf Summer glycyrrhizin high producing strain0.172

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.266
SRR2868004Drought Stress(Tissue:root)0.451
SRR2967015Control (Tissue:root)0.422

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.067
SRR9715740Leave0.128
SRR9715741Leave0.094
SRR9715739Root0.019
SRR9715742Root0.253
SRR9715743Root0.183

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.080
SRR8749028MeJA induced 9h0.550
SRR8749029MeJA induced 9h0.015
SRR8749030Uninduced0.371
SRR8749031Uninduced3.270
SRR8749032Uninduced1.142

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.078
SRR8400027Control-Root0.136

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved