Gene detail information of Glyur002923s00038431.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G49520.1 | 9.00E-36 | WRKY DNA-binding protein 48 |
| NR | XP_003528613.1 | 1.06E-86 | PREDICTED: probable WRKY transcription factor 48-like [Glycine max] |
| Swissprot | tr|Q8VWJ2|WRK28_ARATH | 1.00E-45 | Probable WRKY transcription factor 28 |
| trEMBL | tr|I1KMP6|I1KMP6_SOYBN | 4.00E-87 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G36640.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02923 | 9250 | 11626 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002923s00038431.1 | PF03106.10 | WRKY | 211 | 269 | 4.90E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.905 |
| SRR1783600 | control | 28.778 |
| SRR1783602 | moderate drought stress | 12.723 |
| SRR1811619 | moderate drought stress | 12.585 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.392 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.670 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.063 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.992 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 86.031 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 85.729 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.127 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.285 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.790 |
| SRR2967015 | Control (Tissue:root) | 9.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 8.036 |
| SRR9715740 | Leave | 11.325 |
| SRR9715741 | Leave | 14.938 |
| SRR9715739 | Root | 28.070 |
| SRR9715742 | Root | 22.161 |
| SRR9715743 | Root | 22.866 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 92.812 |
| SRR8749028 | MeJA induced 9h | 152.666 |
| SRR8749029 | MeJA induced 9h | 134.542 |
| SRR8749030 | Uninduced | 74.579 |
| SRR8749031 | Uninduced | 77.110 |
| SRR8749032 | Uninduced | 96.966 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 10.022 |
| SRR8400027 | Control-Root | 15.304 |