Gene detail information of Glyur002926s00039107.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G60130.34.00E-41beta glucosidase 16
NRXP_004506510.13.74E-58PREDICTED: beta-glucosidase 12-like [Cicer arietinum]
COGYP_002509272.14.00E-19family 1 glycoside hydrolase [Halothermothrix orenii H 168]
Swissprottr|Q7XKV2|BGL13_ORYSJ1.00E-47Beta-glucosidase 13 (Precursor)
trEMBLtr|A0A072V4Q7|A0A072V4Q7_MEDTR4.00E-57Glycoside hydrolase family 1 protein {ECO:0000313|EMBL:KEH33175.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0292637417720-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01188E3.2.1.21 EC:3.2.1.21 Starch and sucrose metabolism map00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002926s00039107.1PF00232.13Glyco_hydro_11312101.60E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.169
SRR1783600control22.443
SRR1783602moderate drought stress23.879
SRR1811619moderate drought stress24.060

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain41.120
DRR006520Root Summer glycyrrhizin high producing strain40.429
DRR006521Root Winter glycyrrhizin high producing strain1.133
DRR006522Root Winter glycyrrhizin high producing strain1.021
DRR006523Root Summer glycyrrhizin low producing strain19.510
DRR006524Root Summer glycyrrhizin low producing strain19.698
DRR006525Leaf Summer glycyrrhizin high producing strain3.015
DRR006526Leaf Summer glycyrrhizin high producing strain2.953

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)82.772
SRR2868004Drought Stress(Tissue:root)57.327
SRR2967015Control (Tissue:root)61.437

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.543
SRR9715740Leave3.423
SRR9715741Leave5.490
SRR9715739Root20.891
SRR9715742Root27.912
SRR9715743Root28.292

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h35.423
SRR8749028MeJA induced 9h24.849
SRR8749029MeJA induced 9h23.684
SRR8749030Uninduced8.260
SRR8749031Uninduced2.333
SRR8749032Uninduced4.621

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root50.037
SRR8400027Control-Root45.009

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved