Gene detail information of Glyur002942s00044114.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G71695.17.00E-86Peroxidase superfamily protein
NRKEH26066.10peroxidase family protein [Medicago truncatula]
Swissprottr|Q96520|PER12_ARATH9.00E-108Peroxidase 12 (Precursor)
trEMBLtr|A0A072U9H8|A0A072U9H8_MEDTR0Peroxidase family protein {ECO:0000313|EMBL:KEH26066.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0294272379967+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002942s00044114.1PF00141.18peroxidase763154.90E-63


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.522
SRR1783600control5.602
SRR1783602moderate drought stress3.543
SRR1811619moderate drought stress3.660

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.114
DRR006520Root Summer glycyrrhizin high producing strain1.113
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.266
DRR006524Root Summer glycyrrhizin low producing strain0.390
DRR006525Leaf Summer glycyrrhizin high producing strain0.164
DRR006526Leaf Summer glycyrrhizin high producing strain0.164

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)765.777
SRR2868004Drought Stress(Tissue:root)469.644
SRR2967015Control (Tissue:root)732.274

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.617
SRR9715740Leave0.461
SRR9715741Leave1.370
SRR9715739Root24.549
SRR9715742Root27.385
SRR9715743Root25.072

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.414
SRR8749028MeJA induced 9h0.034
SRR8749029MeJA induced 9h0.772
SRR8749030Uninduced33.547
SRR8749031Uninduced17.574
SRR8749032Uninduced26.456

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root116.034
SRR8400027Control-Root14.019

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved