Gene detail information of Glyur002947s00044698.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G09780.10CRINKLY4 related 1
NRXP_004497498.10PREDICTED: serine/threonine-protein kinase-like protein CCR1-like [Cicer arietinum]
COGYP_001958461.12.00E-18hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9S7D9|ACCR1_ARATH0Serine/threonine-protein kinase-like protein CCR1 (Precursor)
trEMBLtr|A0A072VVX2|A0A072VVX2_MEDTR0Serine/Threonine-kinase CCR1-like protein {ECO:0000313|EMBL:KEH42240.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0294718174129+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.4.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002947s00044698.1PF00020.13TNFR_c63543811.90E-05
Glyur002947s00044698.1PF07714.12Pkinase_Tyr5146634.80E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.180
SRR1783600control3.161
SRR1783602moderate drought stress1.501
SRR1811619moderate drought stress1.463

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.318
DRR006520Root Summer glycyrrhizin high producing strain2.526
DRR006521Root Winter glycyrrhizin high producing strain0.408
DRR006522Root Winter glycyrrhizin high producing strain0.501
DRR006523Root Summer glycyrrhizin low producing strain3.857
DRR006524Root Summer glycyrrhizin low producing strain3.965
DRR006525Leaf Summer glycyrrhizin high producing strain0.494
DRR006526Leaf Summer glycyrrhizin high producing strain0.489

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.913
SRR2868004Drought Stress(Tissue:root)19.359
SRR2967015Control (Tissue:root)18.142

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.368
SRR9715740Leave0.800
SRR9715741Leave0.653
SRR9715739Root4.523
SRR9715742Root2.718
SRR9715743Root2.830

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.968
SRR8749028MeJA induced 9h0.808
SRR8749029MeJA induced 9h0.302
SRR8749030Uninduced0.523
SRR8749031Uninduced0.066
SRR8749032Uninduced0.200

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.815
SRR8400027Control-Root11.337

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved