Gene detail information of Glyur002954s00038146.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02954 | 12694 | 14357 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.843 |
| SRR1783600 | control | 3.336 |
| SRR1783602 | moderate drought stress | 8.222 |
| SRR1811619 | moderate drought stress | 6.925 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.655 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.209 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.399 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.952 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.492 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.166 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.874 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.721 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.928 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.058 |
| SRR2967015 | Control (Tissue:root) | 7.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.335 |
| SRR9715740 | Leave | 3.745 |
| SRR9715741 | Leave | 4.185 |
| SRR9715739 | Root | 1.455 |
| SRR9715742 | Root | 2.327 |
| SRR9715743 | Root | 2.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.342 |
| SRR8749028 | MeJA induced 9h | 9.348 |
| SRR8749029 | MeJA induced 9h | 6.373 |
| SRR8749030 | Uninduced | 29.176 |
| SRR8749031 | Uninduced | 16.178 |
| SRR8749032 | Uninduced | 9.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.643 |
| SRR8400027 | Control-Root | 5.853 |