Gene detail information of Glyur002961s00038604.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G55830.17.00E-99Nucleotide-diphospho-sugar transferases superfamily protein
NRKHN31560.10Exostosin-2 [Glycine soja]
Swissprottr|Q9LY62|GT644_ARATH3.00E-123Glycosyltransferase family 64 protein C4 {ECO:0000303|PubMed:24905498}
trEMBLtr|I1MQ61|I1MQ61_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G32650.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold029612590430800+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT64


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006024  glycosaminoglycan biosynthetic process

GO:0015012  heparan sulfate proteoglycan biosynthetic process


cellular_component

GO:0016021  integral component of membrane


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002961s00038604.1PF09258.5Glyco_transf_64933444.40E-74


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control28.451
SRR1783600control28.276
SRR1783602moderate drought stress25.342
SRR1811619moderate drought stress25.135

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.272
DRR006520Root Summer glycyrrhizin high producing strain18.051
DRR006521Root Winter glycyrrhizin high producing strain17.743
DRR006522Root Winter glycyrrhizin high producing strain17.387
DRR006523Root Summer glycyrrhizin low producing strain16.715
DRR006524Root Summer glycyrrhizin low producing strain16.848
DRR006525Leaf Summer glycyrrhizin high producing strain14.726
DRR006526Leaf Summer glycyrrhizin high producing strain14.544

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.655
SRR2868004Drought Stress(Tissue:root)17.241
SRR2967015Control (Tissue:root)17.380

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.264
SRR9715740Leave23.147
SRR9715741Leave20.042
SRR9715739Root9.181
SRR9715742Root13.637
SRR9715743Root11.721

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h60.814
SRR8749028MeJA induced 9h57.699
SRR8749029MeJA induced 9h70.781
SRR8749030Uninduced47.876
SRR8749031Uninduced40.998
SRR8749032Uninduced49.203

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.244
SRR8400027Control-Root24.881

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved