Gene detail information of Glyur002974s00035226.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G56120.13.00E-48Leucine-rich repeat transmembrane protein kinase
NRKHN08749.11.81E-178Cysteine-rich receptor-like protein kinase 2 [Glycine soja]
COGYP_004571825.16.00E-14serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
Swissprottr|Q9CAL2|CRK3_ARATH3.00E-50Cysteine-rich receptor-like protein kinase 3 (Precursor)
trEMBLtr|K7LRA3|K7LRA3_SOYBN2.00E-144Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G32041.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold029741202226343+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002974s00035226.2PF01657.12Stress-antifung321301.70E-21
Glyur002974s00035226.2PF01657.12Stress-antifung1432296.20E-08
Glyur002974s00035226.2PF00069.20Pkinase3134254.20E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.082
SRR1783600control15.747
SRR1783602moderate drought stress17.904
SRR1811619moderate drought stress17.960

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.810
DRR006520Root Summer glycyrrhizin high producing strain22.212
DRR006521Root Winter glycyrrhizin high producing strain16.507
DRR006522Root Winter glycyrrhizin high producing strain16.199
DRR006523Root Summer glycyrrhizin low producing strain18.274
DRR006524Root Summer glycyrrhizin low producing strain18.230
DRR006525Leaf Summer glycyrrhizin high producing strain20.357
DRR006526Leaf Summer glycyrrhizin high producing strain20.882

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.939
SRR2868004Drought Stress(Tissue:root)29.085
SRR2967015Control (Tissue:root)29.805

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.624
SRR9715740Leave21.400
SRR9715741Leave37.019
SRR9715739Root16.701
SRR9715742Root12.950
SRR9715743Root17.795

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.041
SRR8749028MeJA induced 9h13.925
SRR8749029MeJA induced 9h5.006
SRR8749030Uninduced7.778
SRR8749031Uninduced8.468
SRR8749032Uninduced8.926

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.421
SRR8400027Control-Root27.773

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved