Gene detail information of Glyur002981s00038854.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66980.12.00E-80suppressor of npr1-1 constitutive 4
NRAES59898.20receptor-like kinase [Medicago truncatula]
COGYP_001958461.11.00E-26hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9FID6|Y5392_ARATH3.00E-99Probable receptor-like protein kinase At5g39020 (Precursor)
trEMBLtr|G7I978|G7I978_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:AES59898.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold029812759728694-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002981s00038854.1PF00069.20Pkinase323133.00E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.161
SRR1783600control0.332
SRR1783602moderate drought stress0.000
SRR1811619moderate drought stress0.048

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.096
DRR006520Root Summer glycyrrhizin high producing strain0.146
DRR006521Root Winter glycyrrhizin high producing strain0.049
DRR006522Root Winter glycyrrhizin high producing strain0.049
DRR006523Root Summer glycyrrhizin low producing strain11.040
DRR006524Root Summer glycyrrhizin low producing strain10.875
DRR006525Leaf Summer glycyrrhizin high producing strain17.545
DRR006526Leaf Summer glycyrrhizin high producing strain17.363

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.953
SRR2868004Drought Stress(Tissue:root)9.168
SRR2967015Control (Tissue:root)1.625

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave218.613
SRR9715740Leave307.803
SRR9715741Leave221.012
SRR9715739Root0.504
SRR9715742Root1.263
SRR9715743Root1.485

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.301
SRR8749028MeJA induced 9h1.861
SRR8749029MeJA induced 9h1.247
SRR8749030Uninduced1.153
SRR8749031Uninduced4.481
SRR8749032Uninduced2.052

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.659
SRR8400027Control-Root2.631

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved