Gene detail information of Glyur002983s00040651.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G53030.10ser/arg-rich protein kinase 4
NRXP_003590402.10Serine/threonine protein kinase SRPK1 [Medicago truncatula]
COGYP_004584373.11.00E-11serine/threonine protein kinase with PASTA sensor(s) [Frankia symbiont of Datisca glomerata]
Swissprottr|P51567|AFC2_ARATH6.00E-29Serine/threonine-protein kinase AFC2
trEMBLtr|G7I9C7|G7I9C7_MEDTR0Serine kinase-like protein {ECO:0000313|EMBL:AES60653.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold029832076128617+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.7


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002983s00040651.1PF00069.20Pkinase441846.00E-23
Glyur002983s00040651.1PF00069.20Pkinase3144789.60E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.382
SRR1783600control16.434
SRR1783602moderate drought stress20.886
SRR1811619moderate drought stress20.632

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.557
DRR006520Root Summer glycyrrhizin high producing strain19.467
DRR006521Root Winter glycyrrhizin high producing strain16.955
DRR006522Root Winter glycyrrhizin high producing strain16.462
DRR006523Root Summer glycyrrhizin low producing strain21.014
DRR006524Root Summer glycyrrhizin low producing strain21.065
DRR006525Leaf Summer glycyrrhizin high producing strain9.960
DRR006526Leaf Summer glycyrrhizin high producing strain9.346

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.535
SRR2868004Drought Stress(Tissue:root)26.067
SRR2967015Control (Tissue:root)31.447

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.694
SRR9715740Leave13.281
SRR9715741Leave16.763
SRR9715739Root22.314
SRR9715742Root24.825
SRR9715743Root25.443

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.613
SRR8749028MeJA induced 9h21.539
SRR8749029MeJA induced 9h9.355
SRR8749030Uninduced7.150
SRR8749031Uninduced5.801
SRR8749032Uninduced10.176

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.151
SRR8400027Control-Root21.149

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved