Gene detail information of Glyur002987s00039402.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G79570.10Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
NRXP_003545932.10PREDICTED: probable serine/threonine-protein kinase DDB_G0282963-like [Glycine max]
COGYP_001958461.19.00E-26hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9FPR3|EDR1_ARATH1.00E-46Serine/threonine-protein kinase EDR1
trEMBLtr|I1MJC1|I1MJC1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G41470.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold02987401112851-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002987s00039402.1PF00564.19PB11832672.70E-22
Glyur002987s00039402.1PF07714.12Pkinase_Tyr97512375.40E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control90.104
SRR1783600control90.178
SRR1783602moderate drought stress91.729
SRR1811619moderate drought stress91.089

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain101.910
DRR006520Root Summer glycyrrhizin high producing strain99.287
DRR006521Root Winter glycyrrhizin high producing strain59.064
DRR006522Root Winter glycyrrhizin high producing strain56.860
DRR006523Root Summer glycyrrhizin low producing strain111.222
DRR006524Root Summer glycyrrhizin low producing strain110.736
DRR006525Leaf Summer glycyrrhizin high producing strain30.901
DRR006526Leaf Summer glycyrrhizin high producing strain30.923

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)91.181
SRR2868004Drought Stress(Tissue:root)108.188
SRR2967015Control (Tissue:root)115.471

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave33.448
SRR9715740Leave41.047
SRR9715741Leave43.649
SRR9715739Root12.497
SRR9715742Root77.601
SRR9715743Root64.031

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.363
SRR8749028MeJA induced 9h30.028
SRR8749029MeJA induced 9h5.147
SRR8749030Uninduced7.693
SRR8749031Uninduced1.707
SRR8749032Uninduced3.399

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root83.394
SRR8400027Control-Root85.790

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved