Gene detail information of Glyur002987s00039403.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G16270.20Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
NRXP_006598216.10PREDICTED: uncharacterized protein LOC100801946 isoform X2 [Glycine max]
COGYP_001958461.17.00E-28hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q05609|CTR1_ARATH2.00E-49Serine/threonine-protein kinase CTR1
trEMBLtr|I1MJC0|I1MJC0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G41460.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold029871504321842-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002987s00039403.1PF00564.19PB11742581.20E-21
Glyur002987s00039403.1PF07714.12Pkinase_Tyr95612181.10E-62


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.653
SRR1783600control22.817
SRR1783602moderate drought stress18.779
SRR1811619moderate drought stress18.688

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.731
DRR006520Root Summer glycyrrhizin high producing strain14.739
DRR006521Root Winter glycyrrhizin high producing strain11.100
DRR006522Root Winter glycyrrhizin high producing strain10.629
DRR006523Root Summer glycyrrhizin low producing strain15.091
DRR006524Root Summer glycyrrhizin low producing strain14.911
DRR006525Leaf Summer glycyrrhizin high producing strain19.937
DRR006526Leaf Summer glycyrrhizin high producing strain19.982

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)34.952
SRR2868004Drought Stress(Tissue:root)33.342
SRR2967015Control (Tissue:root)35.369

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave31.556
SRR9715740Leave39.008
SRR9715741Leave34.745
SRR9715739Root2.892
SRR9715742Root13.011
SRR9715743Root12.396

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.489
SRR8749028MeJA induced 9h35.202
SRR8749029MeJA induced 9h19.638
SRR8749030Uninduced17.648
SRR8749031Uninduced16.029
SRR8749032Uninduced14.952

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.007
SRR8400027Control-Root22.262

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved