Gene detail information of Glyur002990s00040091.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38180.1 | 3.00E-27 | FAR1-related sequence 5 |
| NR | XP_006598295.1 | 6.20E-84 | PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max] |
| Swissprot | tr|Q9SZL8|FRS5_ARATH | 6.00E-28 | Protein FAR1-RELATED SEQUENCE 5 |
| trEMBL | tr|K7M9F6|K7M9F6_SOYBN | 2.00E-96 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G04421.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02990 | 12135 | 18851 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | FAR1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002990s00040091.1 | PF03101.10 | FAR1 | 179 | 270 | 6.00E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.016 |
| SRR1783602 | moderate drought stress | 0.084 |
| SRR1811619 | moderate drought stress | 0.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.755 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.558 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.150 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.127 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.281 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.321 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.020 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.142 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.092 |
| SRR2967015 | Control (Tissue:root) | 0.145 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.012 |
| SRR9715740 | Leave | 0.143 |
| SRR9715741 | Leave | 0.043 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.152 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.042 |
| SRR8749031 | Uninduced | 0.051 |
| SRR8749032 | Uninduced | 0.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.069 |
| SRR8400027 | Control-Root | 0.077 |