Gene detail information of Glyur003008s00037191.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G24760.14.00E-41GroES-like zinc-binding dehydrogenase family protein
NRKHM99754.11.21E-66Alcohol dehydrogenase-like 6 [Glycine soja]
COGYP_008753467.12.00E-25S-(hydroxymethyl)glutathione dehydrogenase [Spiribacter sp. UAH-SP71]
Swissprottr|Q8LEB2|ADHL6_ARATH6.00E-49Alcohol dehydrogenase-like 6
trEMBLtr|I1L3S5|I1L3S5_SOYBN5.00E-66Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G29070.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold03008381094+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00001E1.1.1.1, adh EC:1.1.1.1 Degradation of aromatic compounds map01220
Glycolysis / Gluconeogenesismap00010
Fatty acid degradationmap00071
Tyrosine metabolismmap00350
Retinol metabolismmap00830
Chloroalkane and chloroalkene degradationmap00625
Naphthalene degradationmap00626
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003008s00037191.1PF00107.21ADH_zinc_N11071.10E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.546
SRR1783600control3.122
SRR1783602moderate drought stress1.010
SRR1811619moderate drought stress0.775

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.262
DRR006520Root Summer glycyrrhizin high producing strain2.265
DRR006521Root Winter glycyrrhizin high producing strain0.164
DRR006522Root Winter glycyrrhizin high producing strain0.168
DRR006523Root Summer glycyrrhizin low producing strain5.764
DRR006524Root Summer glycyrrhizin low producing strain6.781
DRR006525Leaf Summer glycyrrhizin high producing strain1.440
DRR006526Leaf Summer glycyrrhizin high producing strain1.873

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.120
SRR2868004Drought Stress(Tissue:root)9.985
SRR2967015Control (Tissue:root)11.045

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.255
SRR9715740Leave1.490
SRR9715741Leave1.818
SRR9715739Root1.161
SRR9715742Root1.538
SRR9715743Root1.838

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.805
SRR8749028MeJA induced 9h2.642
SRR8749029MeJA induced 9h2.071
SRR8749030Uninduced7.901
SRR8749031Uninduced3.623
SRR8749032Uninduced2.932

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.643
SRR8400027Control-Root5.482

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved