Gene detail information of Glyur003036s00035116.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G30580.11.00E-104Phospholipid/glycerol acyltransferase family protein
NRXP_004514673.10PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like isoform X1 [Cicer arietinum]
COGYP_003956562.16.00E-34acetyltransferase [Stigmatella aurantiaca DW4/3-1]
Swissprottr|Q9LLY4|LPAT1_BRANA6.00E-1311-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic (Precursor)
trEMBLtr|K7KWK4|K7KWK4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G28331.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold030361904723461-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00655plsC EC:2.3.1.51 Glycerolipid metabolism map00561
Glycerophospholipid metabolismmap00564


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016746  transferase activity, transferring acyl groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003036s00035116.1PF01553.16Acyltransferase1753016.60E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.763
SRR1783600control13.058
SRR1783602moderate drought stress12.690
SRR1811619moderate drought stress12.428

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.638
DRR006520Root Summer glycyrrhizin high producing strain15.707
DRR006521Root Winter glycyrrhizin high producing strain10.577
DRR006522Root Winter glycyrrhizin high producing strain10.088
DRR006523Root Summer glycyrrhizin low producing strain10.955
DRR006524Root Summer glycyrrhizin low producing strain10.778
DRR006525Leaf Summer glycyrrhizin high producing strain7.069
DRR006526Leaf Summer glycyrrhizin high producing strain6.774

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.404
SRR2868004Drought Stress(Tissue:root)13.729
SRR2967015Control (Tissue:root)10.573

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.543
SRR9715740Leave12.220
SRR9715741Leave15.036
SRR9715739Root3.409
SRR9715742Root8.626
SRR9715743Root8.853

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.422
SRR8749028MeJA induced 9h16.233
SRR8749029MeJA induced 9h10.161
SRR8749030Uninduced13.143
SRR8749031Uninduced9.131
SRR8749032Uninduced9.128

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.089
SRR8400027Control-Root25.475

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved