Gene detail information of Glyur003074s00037789.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G03900.11.00E-59adenosine-5'-phosphosulfate (APS) kinase 3
NRAFK41167.13.13E-83unknown [Lotus japonicus]
COGYP_003640994.15.00E-51adenylylsulfate kinase [Thermincola potens JR]
Swissprottr|Q9SRW7|APK3_ARATH9.00E-75Adenylyl-sulfate kinase 3
trEMBLtr|I3SLM5|I3SLM5_LOTJA1.00E-83Adenylyl-sulfate kinase {ECO:0000256|RuleBase:RU004347}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold030741890423477-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00860cysC EC:2.7.1.25 Sulfur metabolism map00920
Purine metabolismmap00230


Gene Ontology

biological_process

GO:0000103  sulfate assimilation


molecular_function

GO:0004020  adenylylsulfate kinase activity

GO:0005524  ATP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003074s00037789.1PF01583.15APS_kinase291236.80E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.221
SRR1783600control3.952
SRR1783602moderate drought stress5.574
SRR1811619moderate drought stress6.163

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.565
DRR006520Root Summer glycyrrhizin high producing strain9.019
DRR006521Root Winter glycyrrhizin high producing strain1.282
DRR006522Root Winter glycyrrhizin high producing strain1.239
DRR006523Root Summer glycyrrhizin low producing strain12.196
DRR006524Root Summer glycyrrhizin low producing strain11.944
DRR006525Leaf Summer glycyrrhizin high producing strain19.947
DRR006526Leaf Summer glycyrrhizin high producing strain17.257

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.180
SRR2868004Drought Stress(Tissue:root)18.660
SRR2967015Control (Tissue:root)11.724

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.154
SRR9715740Leave17.350
SRR9715741Leave10.365
SRR9715739Root0.653
SRR9715742Root1.892
SRR9715743Root1.204

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h32.406
SRR8749028MeJA induced 9h14.211
SRR8749029MeJA induced 9h17.154
SRR8749030Uninduced10.226
SRR8749031Uninduced5.394
SRR8749032Uninduced16.852

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.870
SRR8400027Control-Root18.751

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved