Gene detail information of Glyur003074s00037790.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G16350.10Aldolase-type TIM barrel family protein
NRAES80846.20inosine-5'-monophosphate dehydrogenase [Medicago truncatula]
COGYP_001838659.14.00E-141inosine-5'-monophosphate dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Swissprottr|Q84XA3|IMDH_VIGUN0Inosine-5'-monophosphate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_03156}
trEMBLtr|G7KZG9|G7KZG9_MEDTR0Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_03156, ECO:0000256|RuleBase:RU003928}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold030742507129861+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00088IMPDH, guaB EC:1.1.1.205 Purine metabolism map00230
Drug metabolism - other enzymesmap00983


Gene Ontology

biological_process

GO:0006164  purine nucleotide biosynthetic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0003938  IMP dehydrogenase activity

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003074s00037790.1PF00478.20IMPDH234912.40E-129


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control37.225
SRR1783600control36.417
SRR1783602moderate drought stress41.546
SRR1811619moderate drought stress39.506

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain53.204
DRR006520Root Summer glycyrrhizin high producing strain52.208
DRR006521Root Winter glycyrrhizin high producing strain57.860
DRR006522Root Winter glycyrrhizin high producing strain56.895
DRR006523Root Summer glycyrrhizin low producing strain68.172
DRR006524Root Summer glycyrrhizin low producing strain68.284
DRR006525Leaf Summer glycyrrhizin high producing strain24.819
DRR006526Leaf Summer glycyrrhizin high producing strain24.339

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)71.129
SRR2868004Drought Stress(Tissue:root)63.802
SRR2967015Control (Tissue:root)63.630

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave32.467
SRR9715740Leave31.177
SRR9715741Leave36.619
SRR9715739Root100.074
SRR9715742Root72.551
SRR9715743Root73.962

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h90.920
SRR8749028MeJA induced 9h61.515
SRR8749029MeJA induced 9h68.884
SRR8749030Uninduced42.416
SRR8749031Uninduced52.173
SRR8749032Uninduced108.262

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root73.050
SRR8400027Control-Root69.924

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved