Gene detail information of Glyur003077s00042521.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G29280.13.00E-44WRKY DNA-binding protein 65
NRKEH36643.11.98E-97WRKY family transcription factor [Medicago truncatula]
Swissprottr|Q9LP56|WRK65_ARATH6.00E-62Probable WRKY transcription factor 65
trEMBLtr|A0A072V5L0|A0A072V5L0_MEDTR7.00E-98WRKY family transcription factor {ECO:0000313|EMBL:KEH36643.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold030772413125827-


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003077s00042521.1PF03106.10WRKY34925.20E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.231
SRR1783600control21.462
SRR1783602moderate drought stress31.788
SRR1811619moderate drought stress31.570

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.546
DRR006520Root Summer glycyrrhizin high producing strain10.946
DRR006521Root Winter glycyrrhizin high producing strain26.501
DRR006522Root Winter glycyrrhizin high producing strain26.276
DRR006523Root Summer glycyrrhizin low producing strain3.925
DRR006524Root Summer glycyrrhizin low producing strain4.024
DRR006525Leaf Summer glycyrrhizin high producing strain17.444
DRR006526Leaf Summer glycyrrhizin high producing strain16.965

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)100.489
SRR2868004Drought Stress(Tissue:root)148.851
SRR2967015Control (Tissue:root)106.813

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.387
SRR9715740Leave20.728
SRR9715741Leave22.155
SRR9715739Root37.468
SRR9715742Root19.999
SRR9715743Root21.817

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h65.676
SRR8749028MeJA induced 9h125.835
SRR8749029MeJA induced 9h154.412
SRR8749030Uninduced69.815
SRR8749031Uninduced110.676
SRR8749032Uninduced228.763

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.298
SRR8400027Control-Root24.971

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved